format-version: 1.0
date: 25:07:2008 16:46
saved-by: Pankaj Jaiswal
auto-generated-by: DAG-Edit 1.419 rev 3
default-namespace: plant_disease_ontology

[Term]
id: PDO_test:0002701
name: A: plant disease

[Term]
id: PDO_test:0002702
name: bacterial plant disease
is_a: PDO_test:0002701 ! A: plant disease

[Term]
id: PDO_test:0002703
name: D: trait / symptom

[Term]
id: PDO_test:0002704
name: shoot trait
is_a: PDO_test:0002703 ! D: trait / symptom

[Term]
id: PDO_test:0002705
name: leaf color
is_a: PDO_test:0002704 ! shoot trait
relationship: symptom_of PDO_test:0002718 ! rice bacterial leaf blight disease

[Term]
id: PDO_test:0002707
name: B1: Viridiplanteae

[Term]
id: PDO_test:0002708
name: Sterptophyta
is_a: PDO_test:0002707 ! B1: Viridiplanteae

[Term]
id: PDO_test:0002709
name: Magnoliophyta
is_a: PDO_test:0002708 ! Sterptophyta

[Term]
id: PDO_test:0002710
name: Liliopsida
is_a: PDO_test:0002709 ! Magnoliophyta

[Term]
id: PDO_test:0002711
name: Poales
is_a: PDO_test:0002710 ! Liliopsida

[Term]
id: PDO_test:0002712
name: Poaceae
is_a: PDO_test:0002711 ! Poales

[Term]
id: PDO_test:0002713
name: Oryza
is_a: PDO_test:0002712 ! Poaceae

[Term]
id: PDO_test:0002714
name: B3: genome

[Term]
id: PDO_test:0002715
name: AA rice genome
is_a: PDO_test:0002713 ! Oryza
is_a: PDO_test:0002714 ! B3: genome

[Term]
id: PDO_test:0002716
name: Oryza sativa
is_a: PDO_test:0002713 ! Oryza
is_a: PDO_test:0002772 ! host plant species
relationship: has_genome_type PDO_test:0002715 ! AA rice genome
relationship: isa_primary_host PDO_test:0002740 ! Xanthomonas oryzae pv. oryzae

[Term]
id: PDO_test:0002717
name: bacterial blight disease
is_a: PDO_test:0002702 ! bacterial plant disease

[Term]
id: PDO_test:0002718
name: rice bacterial leaf blight disease
is_a: PDO_test:0002717 ! bacterial blight disease
relationship: found_in PDO_test:0002751 ! State: Western Australia
relationship: found_in PDO_test:0002752 ! State: Northern Territory
relationship: found_in PDO_test:0002753 ! State: Queensland
relationship: occurrence_in PDO_test:0002778 ! seedling stage

[Term]
id: PDO_test:0002719
name: F1: plant structure

[Term]
id: PDO_test:0002720
name: sporophyte
is_a: PDO_test:0002719 ! F1: plant structure

[Term]
id: PDO_test:0002721
name: shoot
is_a: PDO_test:0002720 ! sporophyte

[Term]
id: PDO_test:0002722
name: leaf
is_a: PDO_test:0002746 ! plant organ
relationship: part_of PDO_test:0002721 ! shoot

[Term]
id: PDO_test:0002723
name: E: phenotype

[Term]
id: PDO_test:0002724
name: C: environment

[Term]
id: PDO_test:0002725
name: color
is_a: PDO_test:0002723 ! E: phenotype

[Term]
id: PDO_test:0002726
name: pale yellow
relationship: score_of PDO_test:0002705 ! leaf color
relationship: score_of PDO_test:0002725 ! color

[Term]
id: PDO_test:0002727
name: streaked
relationship: score_of PDO_test:0002725 ! color

[Term]
id: PDO_test:0002728
name: fertility
relationship: score_of PDO_test:0002771 ! viability

[Term]
id: PDO_test:0002729
name: sterility
relationship: score_of PDO_test:0002731 ! inflorescence fertility/sterility
relationship: score_of PDO_test:0002771 ! viability

[Term]
id: PDO_test:0002730
name: inflorescence trait
is_a: PDO_test:0002703 ! D: trait / symptom

[Term]
id: PDO_test:0002731
name: inflorescence fertility/sterility
is_a: PDO_test:0002730 ! inflorescence trait
relationship: symptom_of PDO_test:0002718 ! rice bacterial leaf blight disease

[Term]
id: PDO_test:0002732
name: leaf lesion
is_a: PDO_test:0002704 ! shoot trait
relationship: symptom_of PDO_test:0002718 ! rice bacterial leaf blight disease

[Term]
id: PDO_test:0002733
name: shoot wilting
is_a: PDO_test:0002704 ! shoot trait
relationship: symptom_of PDO_test:0002718 ! rice bacterial leaf blight disease

[Term]
id: PDO_test:0002734
name: B2: Bacteria

[Term]
id: PDO_test:0002735
name: Proteobacteria
is_a: PDO_test:0002734 ! B2: Bacteria

[Term]
id: PDO_test:0002736
name: Gammaproteobacteria
is_a: PDO_test:0002735 ! Proteobacteria

[Term]
id: PDO_test:0002737
name: Xanthomonadales
is_a: PDO_test:0002736 ! Gammaproteobacteria

[Term]
id: PDO_test:0002738
name: Xanthomonadaceae
is_a: PDO_test:0002737 ! Xanthomonadales

[Term]
id: PDO_test:0002739
name: Xanthomonas
is_a: PDO_test:0002738 ! Xanthomonadaceae

[Term]
id: PDO_test:0002740
name: Xanthomonas oryzae pv. oryzae
is_a: PDO_test:0002739 ! Xanthomonas
is_a: PDO_test:0002773 ! etiological agent / pathogen species
relationship: causal_biotic_agent PDO_test:0002718 ! rice bacterial leaf blight disease
relationship: infects PDO_test:0002722 ! leaf

[Term]
id: PDO_test:0002741
name: lesion
is_a: PDO_test:0002723 ! E: phenotype

[Term]
id: PDO_test:0002742
name: yellow to grey lesion
relationship: score_of PDO_test:0002732 ! leaf lesion
relationship: score_of PDO_test:0002741 ! lesion

[Term]
id: PDO_test:0002743
name: Cyperaceae
is_a: PDO_test:0002711 ! Poales

[Term]
id: PDO_test:0002744
name: Genus: Cyperus
is_a: PDO_test:0002743 ! Cyperaceae

[Term]
id: PDO_test:0002745
name: Cyperus rotundus
is_a: PDO_test:0002744 ! Genus: Cyperus
is_a: PDO_test:0002772 ! host plant species
relationship: isa_alternative_host PDO_test:0002740 ! Xanthomonas oryzae pv. oryzae

[Term]
id: PDO_test:0002746
name: plant organ
is_a: PDO_test:0002719 ! F1: plant structure

[Term]
id: PDO_test:0002747
name: biotic environment
is_a: PDO_test:0002724 ! C: environment

[Term]
id: PDO_test:0002748
name: abiotic environment
is_a: PDO_test:0002724 ! C: environment

[Term]
id: PDO_test:0002749
name: G: geographical location

[Term]
id: PDO_test:0002750
name: country: Australia
is_a: PDO_test:0002749 ! G: geographical location

[Term]
id: PDO_test:0002751
name: State: Western Australia
relationship: part_of PDO_test:0002757 ! Region: North-West Australia
relationship: part_of PDO_test:0002758 ! Region: West Australia

[Term]
id: PDO_test:0002752
name: State: Northern Territory
relationship: part_of PDO_test:0002754 ! Region: North Australia

[Term]
id: PDO_test:0002753
name: State: Queensland
relationship: part_of PDO_test:0002756 ! Region: North-East Australia
relationship: part_of PDO_test:0002759 ! Region: East Australia

[Term]
id: PDO_test:0002754
name: Region: North Australia
relationship: part_of PDO_test:0002750 ! country: Australia

[Term]
id: PDO_test:0002755
name: Region: North Northern territory
is_obsolete: true

[Term]
id: PDO_test:0002756
name: Region: North-East Australia
relationship: part_of PDO_test:0002750 ! country: Australia

[Term]
id: PDO_test:0002757
name: Region: North-West Australia
relationship: part_of PDO_test:0002750 ! country: Australia

[Term]
id: PDO_test:0002758
name: Region: West Australia
is_a: PDO_test:0002750 ! country: Australia

[Term]
id: PDO_test:0002759
name: Region: East Australia
is_a: PDO_test:0002750 ! country: Australia

[Term]
id: PDO_test:0002760
name: Region: South Australia
is_a: PDO_test:0002750 ! country: Australia

[Term]
id: PDO_test:0002761
name: State: South Australia
relationship: part_of PDO_test:0002760 ! Region: South Australia

[Term]
id: PDO_test:0002762
name: Oryza rufipogon
is_a: PDO_test:0002713 ! Oryza
is_a: PDO_test:0002772 ! host plant species
relationship: has_genome_type PDO_test:0002715 ! AA rice genome
relationship: isa_alternative_host PDO_test:0002740 ! Xanthomonas oryzae pv. oryzae

[Term]
id: PDO_test:0002763
name: Oryza australiensis
is_a: PDO_test:0002713 ! Oryza
is_a: PDO_test:0002772 ! host plant species
relationship: has_genome_type PDO_test:0002764 ! EE rice genome
relationship: isa_alternative_host PDO_test:0002740 ! Xanthomonas oryzae pv. oryzae

[Term]
id: PDO_test:0002764
name: EE rice genome
is_a: PDO_test:0002713 ! Oryza
is_a: PDO_test:0002714 ! B3: genome

[Term]
id: PDO_test:0002765
name: stress response
is_a: PDO_test:0002703 ! D: trait / symptom

[Term]
id: PDO_test:0002766
name: abiotic stress response
is_a: PDO_test:0002765 ! stress response

[Term]
id: PDO_test:0002767
name: response to bacterial infection
is_a: PDO_test:0002766 ! abiotic stress response
relationship: symptom_of PDO_test:0002718 ! rice bacterial leaf blight disease

[Term]
id: PDO_test:0002768
name: response
is_a: PDO_test:0002723 ! E: phenotype

[Term]
id: PDO_test:0002769
name: resistance
relationship: score_of PDO_test:0002767 ! response to bacterial infection
relationship: score_of PDO_test:0002768 ! response

[Term]
id: PDO_test:0002770
name: susceptible
relationship: score_of PDO_test:0002767 ! response to bacterial infection
relationship: score_of PDO_test:0002768 ! response

[Term]
id: PDO_test:0002771
name: viability
is_a: PDO_test:0002723 ! E: phenotype

[Term]
id: PDO_test:0002772
name: host plant species
relationship: part_of PDO_test:0002747 ! biotic environment

[Term]
id: PDO_test:0002773
name: etiological agent / pathogen species
relationship: part_of PDO_test:0002747 ! biotic environment

[Term]
id: PDO_test:0002774
name: F2: plant growth stage

[Term]
id: PDO_test:0002775
name: vegetative stage
is_a: PDO_test:0002774 ! F2: plant growth stage

[Term]
id: PDO_test:0002776
name: reproductive stage
is_a: PDO_test:0002774 ! F2: plant growth stage

[Term]
id: PDO_test:0002777
name: germination stage
is_a: PDO_test:0002775 ! vegetative stage

[Term]
id: PDO_test:0002778
name: seedling stage
is_a: PDO_test:0002775 ! vegetative stage

[Typedef]
id: causal_abiotic_agent
name: causal abiotic agent of
is_a: causal_agent ! causal agent of

[Typedef]
id: causal_agent
name: causal agent of

[Typedef]
id: causal_biotic_agent
name: causal biotic agent of
is_a: causal_agent ! causal agent of

[Typedef]
id: disease_of
name: disease of

[Typedef]
id: found_in
name: found in

[Typedef]
id: has_genome_type
name: has genome

[Typedef]
id: infects
name: infects

[Typedef]
id: intersection_of
name: intersection of

[Typedef]
id: isa_alternative_host
name: alternative host of

[Typedef]
id: isa_primary_host
name: primary host of

[Typedef]
id: occurrence_in
name: occurrs at

[Typedef]
id: part_of
name: part of

[Typedef]
id: score_of
name: value_of

[Typedef]
id: symptom_of
name: symptom of